Corrupt RPMDB and recovery

rpm command won’t work:

I tried to install some xml related rpms on my Fedora, so checked yum list to see what xml rpms are installed. But the system gave me the below error.

[[email protected] home]# yum list | grep -i xmlrpmdb: Thread/process 31902/140347322918656 failed: Thread died in Berkeley DB libraryerror: db3 error(-30974) from dbenv->failchk: DB_RUNRECOVERY: Fatal error, run database recoveryerror: cannot open Packages index using db3 -  (-30974)error: cannot open Packages database in /var/lib/rpmCRITICAL:yum.main:Error: rpmdb open failed[[email protected] home]#

Tried fixing using “yum clean”

I initially thought it was some issue with yum and its cache, so tried yum clean. That did not work!.

[[email protected] home]# yum clean rpmdb: Thread/process 31902/140347322918656 failed: Thread died in Berkeley DB library error: db3 error(-30974) from dbenv->failchk: DB_RUNRECOVERY: Fatal error, run database recovery error: cannot open Packages index using db3 -  (-30974) error: cannot open Packages database in /var/lib/rpm CRITICAL:yum.main: Error: rpmdb open failed[[email protected] home]# rpm -qa rpmdb: Thread/process 31902/140347322918656 failed: Thread died in Berkeley DB library error: db3 error(-30974) from dbenv->failchk: DB_RUNRECOVERY: Fatal error, run database recovery error: cannot open Packages index using db3 -  (-30974) error: cannot open Packages database in /var/lib/rpm rpmdb: Thread/process 31902/140347322918656 failed: Thread died in Berkeley DB library error: db3 error(-30974) from dbenv->failchk: DB_RUNRECOVERY: Fatal error, run database recovery error: cannot open Packages database in /var/lib/rpm

Corrupted rpmdb:

Taking a closer look, it sounded like rpm db is corrupted. This caused issues in rpm command.

[[email protected] home]# ls /var/lib/rpmBasenames  Conflictname  __db.001  __db.002  __db.003  __db.004  Dirnames  Filedigests  Group  Installtid  Name  Obsoletename  Packages  Providename  Provideversion  Pubkeys  Requirename  Requireversion  Sha1header  Sigmd5  Triggername[[email protected] home]#[[email protected] home]# rpm --rebuilddbrpmdb: Thread/process 31902/140347322918656 failed: Thread died in Berkeley DB libraryerror: db3 error(-30974) from dbenv->failchk: DB_RUNRECOVERY: Fatal error, run database recoveryerror: cannot open Packages index using db3 -  (-30974)[[email protected] home]#

Delete and Rebuild rpmdb:

Deleted the __db* files and did a “rpm –rebuilddb”. It worked perfectly and I was able to do rpm and yum commands.

[[email protected] home]#[[email protected] home]# rm -f /var/lib/rpm/__*[[email protected] home]# rpm --rebuilddb[[email protected] home]# rpm -qa | wc -l629[[email protected] home]#